Wednesday, January 5, 2011

Photos of a Glow-throated Hummingbird Specimen


George Angehr sent me photos of a a specimen of Glow-throated Hummingbird (Selasphorus ardens) from the American Museum of Natural History. The Glow-throated Hummingbird is on the right; on the left is a Scintillant Hummingbird (Selasphorus scintilla). This updates my earlier post of the plumages of the southern species of Selasphorus. I can see how folks might confuse a Glow-throated Hummingbird with a Volcano Hummingbird. Check out the earlier post for all the details.

Saturday, January 1, 2011

More Jacana Hybrids


Here are some more jacanas from western Panama. These birds are not yet prepared as specimens, and before we do that, we'll be careful to document with photos the facial ornamentation. I've got the photo in better quality on my website. However, what you can see is that the right most pair of birds appear to be Wattled Jacanas, to the left appears to be a pure Northern Jacana, and then the three leftmost birds are clearly hybrids, as they have facial ornamentation scrambled between the two species.

The apparent fact that both pure species are intermixing in the hybrid zone, rather than a hybrid zone where most birds are hybirds (as occurs in many other avian hybird zone) suggests that there is a fitness consequence to hybridization. Again, my hunch is strongly that it is cultural rather than intrinsic (see my earlier post). But at least we have confirmation of the hybridization, and a field site to begin monitoring behavior. Next step is to genotype these fresh birds. A great way to start the New Year. Again, check my earlier post, and again I will be collecting your observations of Jacana populations from western Panama to make a detailed map!

Thursday, December 23, 2010

Updates

It's been a long time between posts. Lots of stuff was going on over the past few months personally, so I was quiet, but now that is behind me, and so it's time to get to the news.

First, we've got the mosquitoes sorted and identified to species from our CDC work in the canal watershed and in eastern Panama where we had the encephalitis outbreak. It was back-breaking work for Jose Loiaza who had to identify tens of thousands of mosquitoes. After the holiday break, I will apply for an export permit for these mosquitoes so that the CDC can survey them for diseases.

Secondly, we are training two new Panamanian students in field ornithology and specimen preparation. I'm quite happy about this development, because it means that we are going to have a productive dry season.

Finally, our collaborative group has been funded for another disease project, this time with ticks. It is another opportunity to understand
the relationship between deforestation and disease transmission, since ticks carry Rickettsia, a group of bacteria that are responsible for many diseases such as Rocky Mountain Spotted Fever, Africa tick bite fever, etc. Rocky Mountain Spotted Fever, despite its name, has been known from Panama since the 50's, and recently killed a four year old girl in the canal watershed in 2004. Our current grant provides seed money to develop the Smithsonian's capability of leading research on the intersection of biodiversity and emerging disease, approaching the question from a more holistic, theoretical, and biologically-driven approach than typically undertaken by disease scientists.

I want to point out that our bird group is positioned well to lead these questions because of our commitment to saving everything possible from our specimens. Our earlier CDC project funded us to look at blood-bourne viruses, but because we want to archive all biological material from bird specimens, we've preserved ecto-parasites from our birds. This is the point of biological collections: to archive material for questions that remain to be asked. One only wonders what other knowledge is to be gained from our specimens!

Tuesday, December 21, 2010

A tale of two Jacanas

This story comes to me by way of Neal Smith, emeritus Staff Scientist at the Smithsonian Tropical Research Institute, an observant naturalist, a rabid consumer of scientific literature, and a first rate gentleman.

One day I was in Neal's office, which is a treasure trove of Panama artifacts, tattered maps, dusty photos, and to my surprise, many biological specimens. I came that day to see jacanas. Neal was quite excited to show me some jacana specimens from western Panama.

It is a curious thing, because "odd" jacanas have been popping up in the conversations of Panamanian bird enthusiasts. These often get posted with photos at the Xenornis blog. Here is a photo of a bird with brown dorsal plumage and a weird facial helmet. Here is another example of a "wattled" jacana with a brown dorsal plumage from Gamboa. The birdwatching community is fairly confident that these are vagrant Wattled Jacanas from South America (in much of South America, Wattled Jacanas have brown dorsal plumage).

However, I think I can demonstrate that these birds are in fact hybrids between the Northern and Wattled Jacanas, rather than odd plumages or vagrants from South America. First a review of the two species of jacana in the Americas.

1. Northern Jacana. Found along both coasts of Middle America from near the Texas border south to extreme western Panama on both coasts, as well as in the West Indies. In Panama, it is clearly abundant in Bocas del Toro, its distribution in the Pacific lowlands of Costa Rica and Panama is less clear, probably because there is much less standing water. The Northern Jacana has black and brown plumage with a yellow tri-lobate facial shield and a blue skin patch over the base of the bill.

2. Wattled Jacana. From central Panama south throughout South America. The key identifier of a Wattled Jacana in the Americas is the red bi-lobate facial shield with droops that extend like a handlebar mustache. Birds from Panama have all black plumage, but populations in certain parts of South America have the black and brown plumage pattern found in Northern Jacanas. In fact, most of the South American populations, and in fact all east of the Andes have that plumage. But the Andes are a bit hard for birds to cross (shameless promotion of one of my papers).

So what are these "odd birds". Well, first we need to think about the geography: these sightings are right around where we might expect the two species, Northern and Wattled, to meet. Second, if we look at the literature, we see that hybrids have been discovered for nearly 40 years (Betts 1973: The Auk). (I'm really not sure what the Jenni and Mace [1999] were talking about in Birds of North America online: "No definite hybrids are known, contrary to frequent citation
s of hybridization. Several specimens with intermediate shields or plumage were described aspossible hybrids from Veraguas, Panama (perhaps same specimens; Hellmayr and Conover 1948, Wetmore 1965), and from Osa Peninsula, Costa Rica (Betts 1973). These are possibly just young birds." Not true at all: Betts shows a nice photo of an adult female with red, yellow and blue facial shield and RICTAL WATTLES (that's what I'm calling the handlebar mustache).

Well, what Neal had in his office I think really seals the deal. Apparently Steve Emlen, from Cornell, collected a series of Jacanas from western Panama in the mid-1990s. These jacanas clearly show mixed assemblages of the facial ornamentation of the two species (along with the plumage typical of the Northern Jacana, but drabber, and with much less distinction between the brown and black regions that one would find in a proper Northern Jacana).

I couldn't get big fotos on this blog, so I'll redirect you to my website for the photos. In the first two photos, you can see a Northern Jacana compared to a Wattled Jacana. Note the three lobes in the Northern versus the two lobes and the long rictal wattles (handlebars). In the second set of photos you can see hybrid jacanas compared to a proper Wattled Jacana. Note that the rictal wattles are reduced, and the specimen label notes that the shield had tinges of blue throughout a very palid red (rather than the bright red of a Wattled Jacana). Also, note that the shields are reduced and some are tri-lobate (like Northern Jacanas) rather than the bi-lobate form of Wattled Jacana. In the final picture, you can see the variable nature of the brown plumage on the underparts, and you might find that it's easier to see the reduction of the rictal wattles.


Hybridization in the eight species of jacanas (the remaining six species are found in the Old World) is unknown except for Wattled and Northern. Likewise, Wattled and Northern Jacanas have often been classified as conspecific. Below is a a small phylogeographic tree of the two species. The data come from the DNA barcode (COI) region, a small section of mitochondrial DNA.



The first thing that you should note is that there is consistent genetic differentiation between Wattled (J. jacana) and Northerns (J. spinosa). This is what you would expect to see if the two forms were really separate species, though this doesn't PROVE that they are distinct species. (But with the hybridization data, it makes a strong case, more on that below). Secondly, the is little genetic variation in either species across their sampled ranges, and none of the variation is geographically structured. That suggests that each species is able to maintain gene flow over long distances, and that maybe the species are relatively young. The final thing that you should notice is that the degree of genetic differentiation between the two species is small (about 1.5%), which confirms that they split recently, and falls within the range that we expect hybridization to be possible (several studies have show that there are genetic incompatibilities that make even successful hybrids inviable after about 7-8% differentiation).

The fact that Wattled Jacanas from Cocle have Wattled Jacana mtDNA and Northern Jacanas from Chiriqui have Northern mtDNA suggests that the species boundary is relatively robust between these two forms. Ornithologists used to think that if there was hybridization, then "speciation was not complete", and therefore called the two forms subspecies. We now know that a narrow hybrid zone where genes come in but don't leak beyond the narrow hybrid zone is a fairly common stage at the tail end of the speciation process, and that for most of the individuals in each species, species-specific genetic cohesion is maintained. So I think that it's fair to say that the hybridization actually substantially bolsters the argument that we've got two reproductively-isolated species here.

But that final part is where things get interesting, and where I hope to have a student working on this question next year. First, we need to improve our sample of mtDNA to demonstrate that outside the contact zone that species-specific genetic cohesion is maintained (sample of one and three don't exactly pass muster in peer review). Secondly, what is the genetic composition of the hybrids? Do they always Northern mtDNA, which would suggest a mating of a Northern female with a Wattled male, since mtDNA is transmitted only by mothers, or do they only have Wattled mtDNA, which would suggest the reverse? Often we find unidirectional hybridization, that is either because one species is demographically much larger than the other, or because one species prefers mates of the other. Such is the case in the Manacus hybrid zone in Bocas del Toro, where candei females prefer the golden plumage of vitellinus males over the white collars of the males of their own species.

One of the interesting aspects of jacana biology is that they have a curious polyandrous mating system. Females have harems of males. Each male receives a clutch, but it may or may not be its offspring that he cares for (This comes from Steve Emlen's paper in Proceeding of the Royal Society published in the late 90s; their study population was in Gamboa: there is a nice PBS movie about this research). From the female perspective there is little disadvantage to hetero-specific mating (i.e. across species lines), compared to most bird species where the female gets only one clutch per season and so therefore much be much choosier about her mate. This may facilitate the hybridization. So my student will need to do some behavioral ecology to get at this question too.

Finally, what limits the gene exchange among jacana species? There must be something going on because Jacanas don't make a hybrid swarm where the two species are completely blurred and we can't draw limits to species.

Because mitochondrial genes are passed through the female line, and in birds, unlike mammals, females are heterogametic (i.e. have the two different classes of sex chromosomes) mitochondrial DNA might have a much harder time crossing the species boundary compared to nuclear DNA. This is because of the phenomenon of Haldane's Rule, which observes in hybridization the heterogamic sex suffers the consequences of hybridization more severely than the other sex....thus we observe only female mules, because any male offspring of a horse X donkey mating are inviable and are aborted. If Haldane's Rule is operative, and there is no reason to think that it isn't, we should observe that most hybrids are male (which we would need to do during the preparation of museum specimens, since sex organs are inside birds), and perhaps more interestingly, we should also observe that nuclear DNA is moving quite handsomely between the two species since hybrid males may successfully be mating and backcrossing, bringing a half a genome's worth of heterospecific DNA into the backcross.

However, there are two ways that the breeding system might actually put the stops to the introgression of heterospecific genes. First, imagine that a male rears his clutch, if it is clearly conspecific, he doesn't know whether or not the clutch is his. But if it is a hybrid clutch he can be pretty sure that it isn't his, and perhaps his care is reduced, or the clutch is abandoned, or perhaps even killed. Again, this is where observations are important. Secondly, we've seen that the secondary sexual traits of hybrids are under-developed (the facial shields and wattles). Perhaps hybrid males are "unlucky in love" as it were, and since it is likely hybrid males that are the engines of backcrossing gene flow (backcrossing being the means of getting heterospecific DNA into the parental population), then if they don't mate often, they are "socially sterilized" rather than intrinsically sterile.

There's a lot of interesting biology yet to be discovered in the jacana hybrid system, but the first thing that we need to do is map the hybrid zone. So, when you are out birdwatching, I beg you to pay some attention to the flocks of Jacanas that you see. Both kind of data points are considerably useful: if you only see Wattled or Northern that is as useful as if you see mixed flocks. If you can email me (millerma AT si DOT edu) with your sighting, I'll update this posting with a map of your points. This is a great opportunity to do some citizen science here in Panama!

Wednesday, September 29, 2010

The guide to plumages in the southern Selasphorus

I had an opportunity to visit the US National Museum in Washington DC earlier this month. As I've said before, I have an interest in the historical biogeography of the the species of Selasphorus that are found in Costa Rica and Panama. There's a lot ofconfusion about species limits and plumage patterns. Here's a quick guide.


The current, definitive taxonomy of this group comes from Gary Stiles's 1983 article published in the Auk. That article can be freely accessed on line from the SORA collection, here. Stiles notes the following taxa:

Selasphorus flammula (Volcano Hummingbird) with three subspecies
flammula (endemic to the Irazú and Turrialba volcanoes in Costa Rica)
simoni (endemic to Volcán Poás in Costa Rica)
torridus (the most widespread form, througout the Talamanca range in Costa Rica and Panama)

Selasphorus scintilla (Scintillant Hummingbird) with one subspecies
Selasphorus ardens (Glow-throated Hummingbird)
with three subspecies

It's important to note that prior to Stiles's work, no one was certain of the relationship amongst the three subspecies of Volcano Hummingbird,
and often it was considered that one or two of these subspecies as actually related to either the Glow-throated or the Scintillant (for reasons that will make sense when you look at the photo to the right). Gary focused on morphological characteristics to determine species limits. And from looking at dozens of prepared study skins, Gary found that throat color not withstanding, he could lump the specimens into three bins (flammula, scintilla, and ardens).

So, above, I present a figure of the three plumages of the Volcano Hummingbird, and the Scintillant Hummingbird. I don't show the Glow-throated Hummingbird, because the US National Museum didn't have any specimens (at least male specimens). There aren't vary many specimens of Selasphorus ardens (Glow-throated) out there; so perhaps George Angehr can get a photo the net time that he's at the American Museum on Central Park West. Based on field guides and George's description of the Glow-throated Hummingbird, it must look a lot like the simoni race of Volcano Hummingbird.

And there is an apocryphal account of a Selasphorus from the top of Cerro Hoyo, with no surviving specimens, that might very well be another species lost to science. Obviously, I don't have a photograph of that one either.